Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854986.1_cds_XP_016512716.1_25329
CDS Infomation

[gene=LOC107829762] [db_xref=GeneID:107829762] [protein=jmjC domain-containing protein 4-like] [protein_id=XP_016512716.1] [location=complement(join(12805..13238,13595..13703,13804..13860,14509..14589,14698..14767,15153..15270,15409..15571,15754..15924,16003..16212))] [gbkey=CDS]
Sequence

ATGGGATTGAAAATTGGAGGAAGAGTTCAAAAAGTGAACGGAAGAGAAGTTAGTTACGGT
GAGTTTGTGGAGAAATATATGGCCCAAAACCAACCTGTGGTTCTTACTGGACTTATGGAC
GATTGGAGGGCTTGCAAGGACTGGGTCTCTCCTAATGGAAAACCTAATCTTCACTTTATC
TCCACCCATTTTGGGAAATCCAAAGTTCAGGTTGCGGATTGTGGGACCAGAGAGTTCACT
GATCAGAAGAGAATAGAAATGACTGTTTCTGAATTCGTTGATCATTGGCTTCATCTTTCT
TCTGCTAATAATGGTGGTAACTGTGACTGTGGTGCTGCTGGCAAGCCTTTATTATATTTG
AAAGATTGGCATTTTGTAAAGGAGTATCCGGAGTATATTGCATACAGAACTCCCGTGGAC
TTTTCTGATGACTGGCTGAATCTTTATCTTGACAAATTTCATATGCATAATGATCCTGAT
ACATACAGTGAGAGAAATGAAATAAGTTGCTCTGACTATCGTTTTGTATACATGGGAGCA
AAAGGAACATGGACACCTCTTCATGCTGATGTATTCAGGTCATACAGTTGGTCTGCAAAT
GTCTGTGGAAAAAAGCAGTGGTATTTTCTGCCTCCAAGTCAACATCACTTGGTTTTTGAC
AGGAATATGAAAAGTACCGTATATAACATTTTTGCCGATGTTTCTCAATCAAAATTTCCT
GGATTTGAAAAGGCTGTCTGGTGGGAGTGCACCCAAGAGGAAAATGAAGTAATCTTCGTG
CCCAGTGGATGGTATCATCAAGTTCATAATCTGGAGGATACCATATCCATAAATCATAAC
TGGTTCAATGGATATAATTTATCGTGGGTGTGGGATTTACTTTTGAAAGACTACACTGAG
GCTAGTGATTACATCGAAGACCTCAAAGGATGTGATGATTTTGAGGAGCTTTGTCAGCGA
AACCTTGCAGCTAATACGGGCATGAACTTCTACGACTTCTTCATTTTCATTGTGCGCTTT
GCCTTTGCAAATGTAGCCGTACTTCATAAACTTGGCCATGGAAAGAAAGAACCAAGTCGG
AAATCCTCAGAAATGATTCAGCACATATATTTCAACCTCGAATCTATAAGAAGTATTGCT
GTGAAGATGAAAAACATAGATGCAGGTAACAGACAAGGTGTTTTACTTGATTTGAGGAAA
AACCTGGAGGATCACTCGTTTATAGAGCTCTATGCTGCCGTTGGGAAAACATATGAATTG
ATACATGAACAAAGTGAGGTGACCCAAGCATTATCGCAATGTAAAGAGTTGACGTTTTCT
AGTTTGATTGGATCCCAAGTTCAGAGTTCTGAAGACCTAGTTACCTTTATCGATGATGCT
CTGACAGAATTGGGTGGTGCTTTCTCTGGTTAG

Peptide Sequence

PEP ID

XP_016512716.1
PEP Infomation

PREDICTED: jmjC domain-containing protein 4-like [Nicotiana tabacum]
Sequence

MGLKIGGRVQKVNGREVSYGEFVEKYMAQNQPVVLTGLMDDWRACKDWVSPNGKPNLHFI
STHFGKSKVQVADCGTREFTDQKRIEMTVSEFVDHWLHLSSANNGGNCDCGAAGKPLLYL
KDWHFVKEYPEYIAYRTPVDFSDDWLNLYLDKFHMHNDPDTYSERNEISCSDYRFVYMGA
KGTWTPLHADVFRSYSWSANVCGKKQWYFLPPSQHHLVFDRNMKSTVYNIFADVSQSKFP
GFEKAVWWECTQEENEVIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLKDYTE
ASDYIEDLKGCDDFEELCQRNLAANTGMNFYDFFIFIVRFAFANVAVLHKLGHGKKEPSR
KSSEMIQHIYFNLESIRSIAVKMKNIDAGNRQGVLLDLRKNLEDHSFIELYAAVGKTYEL
IHEQSEVTQALSQCKELTFSSLIGSQVQSSEDLVTFIDDALTELGGAFSG

Transcript Sequence

Gene sequence data has not been registered.